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Helicobacter hepaticus (Species)

Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter; Helicobacter hepaticus;

This taxon was found in 4.0% of laboratory mice cecum, 41.84% of wild mice ileocecum (with ≥1% threshold).

Relative abundance

Relative abundance in each sample

Sample accession Project accession Sampling location Genotype Vendor Origin Count Relative abundance (%)
SRS2290134 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1821 15.76
SRS2290083 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1672 12.83
SRS2290049 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1076 12.73
SRS2290017 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1279 9.46
SRS2290048 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1155 9.04
SRS2290050 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1108 7.04
SRS2290086 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 622 6.62
SRS2290051 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 692 5.82
SRS2290055 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 816 5.50
SRS2290140 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 860 4.68
SRS2290015 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 486 4.49
SRS2290157 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1495 4.33
SRS2290099 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 565 4.30
SRS2290119 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 416 3.65
SRS2290082 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 410 3.56
SRS2290031 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 483 3.52
SRS2290102 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1282 3.27
SRS2290023 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 441 3.27
SRS2290085 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 378 3.16
SRS2290105 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 610 3.02
SRS2290018 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 416 2.91
SRS2290019 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 353 2.75
SRS2290096 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 381 2.57
SRS2290103 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 289 2.54
SRS2290058 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 318 2.51
SRS2290073 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 870 2.44
SRS5679035 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 137 2.40
SRS2290148 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 280 2.00
SRS2290107 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 219 1.85
SRS2290093 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 267 1.75
SRS2290124 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 663 1.72
SRS5679077 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 77 1.69
SRS2290039 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 242 1.66
SRS5679078 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 61 1.57
SRS2290052 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 216 1.49
SRS2290061 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 184 1.47
SRS5679080 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 61 1.38
SRS2290059 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 476 1.37
SRS2290075 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 591 1.31
SRS2290100 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 524 1.30
SRS2290243 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 454 1.27
SRS2290081 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 530 1.27
SRS2290079 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 568 1.15
SRS2290024 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 131 1.14
SRS2290207 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 448 1.08
SRS5679032 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 32 1.02
SRS5679026 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 51 1.00
SRS2290104 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 131 0.99
SRS2290014 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 137 0.99
SRS5679024 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 35 0.95
SRS2290021 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 102 0.93
SRS5679033 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 20 0.86
SRS2290242 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 83 0.79
SRS2290217 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 127 0.78
SRS2290072 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 96 0.76
SRS2290074 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 89 0.73
SRS5679079 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 32 0.67
SRS2290016 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 83 0.65
SRS2290233 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 200 0.64
SRS2290201 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 207 0.64
SRS2290175 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 321 0.60
SRS2290202 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 134 0.55
SRS2290056 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 51 0.53
SRS2290020 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 80 0.53
SRS2290205 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 169 0.49
SRS2290210 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 51 0.47
SRS4889698 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 134 0.45
SRS2290164 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 58 0.41
SRS2290163 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 159 0.41
SRS2290077 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 188 0.39
SRS2290203 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 118 0.36
SRS2290214 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 48 0.36
SRS2290208 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 39 0.35
SRS2290076 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 112 0.33
ERS2716197 ERP110263 Duodenum C57BL/6 Envigo Laboratory 137 0.29
SRS2290158 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 124 0.28
SRS4889696 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 153 0.27
SRS4889366 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 121 0.26
SRS5679046 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 10 0.26
SRS2290216 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 35 0.24
SRS5679068 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 10 0.19
SRS2290136 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 20 0.17
SRS4889343 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 51 0.17
SRS4889619 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 73 0.17
SRS4889367 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 48 0.12
SRS2290213 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 13 0.12
ERS2716208 ERP110263 Duodenum C57BL/6 Envigo Laboratory 13 0.11
SRS5679025 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 4 0.10
SRS5679034 SRP230331 Cecum C57BL/6 Charles River Laboratories Laboratory 4 0.08
ERS2716231 ERP110263 Ileum C57BL/6 Envigo Laboratory 13 0.08
ERS2716443 ERP110263 Jejunum C57BL/6 Envigo Laboratory 4 0.05
SRS4889336 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 23 0.05
SRS2290206 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 13 0.04
SRS2290212 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4 0.03
SRS2290200 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 7 0.02
SRS4889319 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 4 0.02
SRS4889617 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 7 0.01
SRS2290244 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4 0.01
ERS2716409 ERP110263 Jejunum C57BL/6 Envigo Laboratory 4 0.01
ERS2716146 ERP110263 Duodenum C57BL/6 Envigo Laboratory 4 0.01
SRS4889530 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 4 0.01
SRS4889553 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 4 0.01